Browse of TCMCG065C02913 protein

CDS

Accession Number	TCMCG065C02913
gbkey	CDS
Protein Id	XP_004953500.1
Location	complement(join(34988194..34988614,34988863..34989356,34989844..34990555,34990778..34990848,34990931..34990995,34991159..34994306,34994384..34994446,34995973..34996041,34996221..34996256,34997025..34997063,34997189..34997310,34997409..34997445))
Gene	LOC101778166
GeneID	101778166
Organism	Setaria italica

Protein

Length	1758aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA207554
db_source	XM_004953443.3
Definition	protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X4 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	helicase superfamily c-terminal domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K11320        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000228        [VIEW IN EMBL-EBI] GO:0000785        [VIEW IN EMBL-EBI] GO:0000790        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005618        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006952        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009607        [VIEW IN EMBL-EBI] GO:0009617        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0010038        [VIEW IN EMBL-EBI] GO:0016514        [VIEW IN EMBL-EBI] GO:0030312        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042742        [VIEW IN EMBL-EBI] GO:0043207        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044427        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044454        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046686        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051707        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070603        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0098542        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1904949        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTAAGTAACTTAGGCTCGAAGAATTTGATTGTAGATTCTTCGAACCAGGCCAATGGCTGCGATCATGATACTGCTCACTCTTCAAGTGACGATGGCAATTCTTCTGAGGAAGAAGACGATGGCCATTCTTATGCTGAATTTGTTAAGAAGAATCATGGAAAAAGTAATGGCAACATCTCTTCTATAGATGAGCAGGAAGACAAAGATTATGTTGCTGCTGATGAAGGAAAGGATGATGAAGCAACTTTGTCTGAAGAGGAAGAGTTAGCAAAGAAAGAAGTTCCTGATCATCTGGAAGAGATTAAGTTATTGCAAAAGGAGAGCGAGATACCACTAGAAGAACTTCTTGCGATGTACCAGAAGGATGGCTATGCAGATCATGAAACAACGGAGTTGGAGAATTCACCCTGTATTGTTGAAGAGACTAATACTGACATGTCGTTGGATGATCAATCTGCAAAGATTCTTGAAGTGAACAGTGATACAGTTGTGGGTCACCTATCTGCGGATGTGATGAAAACTGAGCATAATGTGACTGCTAATTCTATGCAATCAGAAATAGTACCAGAGCCTTGCGCACAACAGAATTTTGTGGAAGAGAATAATCTCGCTGATGTTAACACGGTCAATGGAGATAAAAGTGACGATGTAATTGCTGATGCTGCAGCTGCTGCCAGATCAGCACAACCAACTGGTAACACCTTCTTGACAACAAATGTGCGCACGAAATTCCCATTCCTTCTTAAGCATTCGCTTCGCGAATACCAGCATATAGGGTTGGATTGGTTGGTTGCAATGTATGAGCAGAGGCTTAATGGAATTCTAGCAGATGAAATGGGTCTAGGCAAGACAATCATGACTATCTCCTTGCTTGCACATCTTGCATGTGAGAAGGGGATATGGGGTCCTCATCTTATCGTTGTGCCAACTAGTGTTATGCTAAACTGGGAGACTGAATTTCTCAAGTGGTGTCCTGCTTTTAAAATATTGACTTACTTTGGAAGTGCAAAGGAGAGAAAGCAAAAGCGTCAGGGCTGGATGAAACCAAATTACTTCCATGTTTGCATCACAACATACAGGCTTGTCATCCAGGACTCTAAAGTGTTTAAGCGAAAAAAGTGGAAGTATCTTATTCTTGATGAGGCTCATCTGATAAAGAACTGGAAATCACAGCGATGGCAGACTTTACTTAATTTTAATTCAAAACGACGCATTCTTTTGACTGGAACTCCGCTGCAAAATGACCTCATGGAACTTTGGTCCCTGATGCACTTTCTGATGCCTCATGTATTTCAGTCTCACCAGGAGTTCAAGGATTGGTTCTGCAATCCAATTTCAGGAATGGTGGAGGGCCAAGATAAAGTAAATAAAGAAGTCATAGATCGATTGCACAATGTCCTTCGTCCATTTATACTGCGGCGGCTGAAAAGAGATGTCGAGAAACAGTTACCAAAGAAGCACGAGCATGTCATATATTGCCGACTTTCTAGAAGACAAAGGAATTTGTATGAAGATTTTATTGCTAGCTCAGAGACACAAACAACACTAGCAAGTGGGAATTATTTTGGCATGATAAGTATCATTATGCAACTTAGAAAGGTCTGTAACCACCCAGATCTTTTTGAAGGTCGCCCAATAATAAGCTCATTTGACATGGCTGGGATTAACATGCATCTCAGCTATTCAGTATGCATGCTCCTTGATAAGAATCCGTTTTCTCATGTGGACCTATCTGATATGAATCTTGTGTTTACTCAAAATGAATTTGGCATGAGTTCCTGGGAAGCTGACGAGGTGGTTGCTGCTTTTCCTCCAAGTATCACCTCCCGGGACTCTCAGCTGGATATATCCTGCTCGAAAAAGGATCATCAGGGGAGTAATGTAACAAATATTTTTGAAGATATTCAGAAAGCCCTACAGGATGAGAGAATAAAGGAATCCAAAGAAAGGGCAGCTTCCATTGCATGGTGGAATAGGTTACGATGTGAAAAGAGGCCTGTCTATGGCACAAATATGAGAGAGGTTTTGACTGTAAAGCATCCTGTATCTGATATTCTTGAGAAGAGGAACAACCCTTTGTGCCACATGGATTATTCATCGAGCCTAGCAGACCTTGTTCTTCCATCAGTGGAACGGTTTCAGAAACTGCTTGATATTGTGGAATCATTTACATTTGCAATTCCTGCTGCTCGAGCTCCTCCCCCTGTTTGCTGGTGCAGCAAAGGGAAGTCTCCTGTTTTTATTGATCCGGCATATAGAGAAAAATGCACGAATGAGTTTTCCCCCATTCTGTCTCCTATAAGGTCTGCTATTGTTCGCCGCCAAGTTTACTTTCCTGATAGGCGTTTGATCCAGTTTGATTGTGGCAAGTTGCAGGAACTTGCCATTCTGCTGAGGCGTTTGAAGTCAGAAGGGCACAGAGCCTTGATATTTACTCAGATGACTAAGATGCTTGATGTCTTGGAAGAGTTCATAAATTTATATGGGTATACATATTTACGTTTAGATGGTTCTACACCGCCAGAAGAGAGGCAGACCCTCATGCAGAGGTTCAATACAAATCCAAAGTTTTTCCTTTTCATTTTGTCTACTCGTAGTGGTGGTGTGGGAATCAACCTAGTAGGTGCGGACACTGTCATATTCTATGACAGTGACTGGAACCCTGCAATGGACCAACAGGCACAGGACAGATGTCACAGGATTGGTCAGACTCGTGAAGTTCACATATATAGACTCATTAGTGAAAGCACTATAGAGGAGAACATTCTGAAGAAAGCGAATCAGAAACGAGCTCTTGATGATCTAGTGATACAGCGAGGTAGCTACAATACAGAGTTTTTCAAGAAGCTCGATCCTATGGAGTTCTTTTCTGGGCACACGTCTCTTCGTGTGGAAGACCAGCAGAAGGACTGCTCTATGACTGCCGGATCTTCAAATGATGCGGATGTGGGGTTGTCAAATGCAGATGTTGAAGCGGCTATTAGACAAGCAGAAGATGAAGCTGACTATATGGCTCTCAAGAAGCTAGAGCAGGAAGAAGCCGTGGACAATCAAGAGTTCAGCGAGGAGGCTGCTGGTAGACCAGAGGATGATGATTTGGTAAATGAGGAGGATGCAAGACACGATGAACACATTATCGAAGAACATAGATATAACTCTTCGGATATGGAGAAGGAGAAGAATGCTGCTTTGTCCAATCAATTAAATGAAGAAAAGGCTCTTACATTGGCTGTTGGTGATGAAGATACAGACATGCTTGCTGATGTGAAACAGATGGCTGCCGCCGCAGCTGCTGCAGGACAAGCAAGTTCGTCCTTCGAAAACCAGCTCCGGCCAATTGATAGATATGCAATGCGCTTTATGGAACTCTGGGATCCAGTAATTGACAAAGCTGCTATAAATCGTCAAGTAAATGTTGAAGAGGAAGAATGGGAGCTCGATCGCATTGAAAAACTCAAAGAGGATTTAGAAGCAGAAATTGATGAAGACCAGGAACCGCTTTCTTATGAATCCTGGGATGTTGATTTTGCTACGACAGCCTATCGCCAACATGTTGAGGCTTTAACTCAAAAGCAGTTGTTGGAAGAACAGGAAAAACAGGCTCGGGAAGCTGCAAAAGAGTTGGAGGAGAAAAATGATAATATGAGCGCTCACCGTAGAAAGTCAAAAAAGAACAAAAAGAAGACCGGCAAGTTCAAGTCCCTGAAAAGAGGACGTTTGTCATCTGAATCAGAAGTCATACTGGAGGAAACTTCTGTAGATACAATGAGCATTGATGACAATGCACCCTCACCTGAACTCATAAGTGATGAATCACCTCGCCATTATTCTAACAAGCGTAAGAAGATTATGTCTGCTACTGAAGAAGAAAACAGTAACAGAAGTTTGAAGAAGTTCAAGAAAGCCACTAAATCAAGTAGTGCCTCAGAAGCCTTGTCACCTAGGCACTTGAGGGAAGAGTTTAATGATTCAGATCCAAAATCGGCAGCTAGAACTAAGAGTGATGGCAGAATTTCCATCCCTTGCATGTCAGTAAAACGTGTTATTGTAATAAAACCTGAGAGGCTGAAAAAGAAGGGAATATGGTCTCGTGATTGTGCTTCAGACTCATGGACATCTGAGGAGGATGCGGTTCTTTGCGGAACTGTGCATGAGTATGGTCCTCTTTGGGAACTGGCAAGTGATTTTCTTCATTCCTTACCAGGTGGTGCTTTTTATAGGGGAAAATATCGTCATCCAGTGCATTGCTGTGAGAGATACCGAGAACTATTCTGCAAACATGCAATGTCAGCAACAGATAATTCTAACAGTGAAAAGGTTCCTTCTGGGACTGGAAAGGCTATACTGAGAGTATCTGAGGATCAAGCTCAGATGTTGGTGAATGTGACCAGTGAACTTCCTAACAATGAGTTGCTTCTCCAGAAACACTTCATGGCTGTACTTTCATCTGTCTGGAGATCAAAATGCCGGCGTGATCCCCGGCGTGTTATAAGTACTTACTCTAGTGCACTACGCATGCTTTCTCCTGTGAAAAATCCTGCTGGATCAAGTGCGAACTGGTCCATGGTAAACTTTAGACCAAGCTTCAATCTAGTTAGGACAGCCCTTGCAGATGCTCAGGCTCAATCTACACAAATTGTGATTCCGCCACCGATGAGAAATCAAGAATACTGCCGGAATCATTTAGAATTAGAATTGGATTTCTTGACAGATCAGCATCATTATGAAGAGGACTTCCCATCTATAGTAAATGTGTCCATACTAGAACCAGAACCAATCAAACAGGCTGTGGAGCCAGTGGAACAATCACTATTGTCTGGACTTTCTTGTAGACAAGCTGAGACCAGACTCAGAATGGCATCAGAAGCTTGTTATGAAGGTGAAGGTTCTCATTGGGCATCATCAGCTTTCCACATAAATGATGCCACCCGGCATAAATCTGGGCCAAAGTCCATAGGAAAGCACAAAGCAGCATCAGAATGTGGAAGACCTCCCAAATCAAAAATCCAGAAGATTACTGAATCGCATCAGGAAGGGCCAAGTACCTCGAGTAATTTTCTTCGGATGCCTGGTCAACTTTTCCCAGGTGCAGCTGACTTCCACATTAGCGAGTCCCTATCTGACTTTGGTATCAGCGATTCTGAATTCAACTACTCCGAGGATCTCTGGCAAGAGGTTGACTACAACGAGTTCCTCCTGGACCAGGATGACTCTGGTCTCCTTCCTGGTATTGAGGAGTTAGAACCTCTTTCAGATTTCACAGATATTGGATGA

Protein:   MLSNLGSKNLIVDSSNQANGCDHDTAHSSSDDGNSSEEEDDGHSYAEFVKKNHGKSNGNISSIDEQEDKDYVAADEGKDDEATLSEEEELAKKEVPDHLEEIKLLQKESEIPLEELLAMYQKDGYADHETTELENSPCIVEETNTDMSLDDQSAKILEVNSDTVVGHLSADVMKTEHNVTANSMQSEIVPEPCAQQNFVEENNLADVNTVNGDKSDDVIADAAAAARSAQPTGNTFLTTNVRTKFPFLLKHSLREYQHIGLDWLVAMYEQRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPKKHEHVIYCRLSRRQRNLYEDFIASSETQTTLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMHLSYSVCMLLDKNPFSHVDLSDMNLVFTQNEFGMSSWEADEVVAAFPPSITSRDSQLDISCSKKDHQGSNVTNIFEDIQKALQDERIKESKERAASIAWWNRLRCEKRPVYGTNMREVLTVKHPVSDILEKRNNPLCHMDYSSSLADLVLPSVERFQKLLDIVESFTFAIPAARAPPPVCWCSKGKSPVFIDPAYREKCTNEFSPILSPIRSAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDVLEEFINLYGYTYLRLDGSTPPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHTSLRVEDQQKDCSMTAGSSNDADVGLSNADVEAAIRQAEDEADYMALKKLEQEEAVDNQEFSEEAAGRPEDDDLVNEEDARHDEHIIEEHRYNSSDMEKEKNAALSNQLNEEKALTLAVGDEDTDMLADVKQMAAAAAAAGQASSSFENQLRPIDRYAMRFMELWDPVIDKAAINRQVNVEEEEWELDRIEKLKEDLEAEIDEDQEPLSYESWDVDFATTAYRQHVEALTQKQLLEEQEKQAREAAKELEEKNDNMSAHRRKSKKNKKKTGKFKSLKRGRLSSESEVILEETSVDTMSIDDNAPSPELISDESPRHYSNKRKKIMSATEEENSNRSLKKFKKATKSSSASEALSPRHLREEFNDSDPKSAARTKSDGRISIPCMSVKRVIVIKPERLKKKGIWSRDCASDSWTSEEDAVLCGTVHEYGPLWELASDFLHSLPGGAFYRGKYRHPVHCCERYRELFCKHAMSATDNSNSEKVPSGTGKAILRVSEDQAQMLVNVTSELPNNELLLQKHFMAVLSSVWRSKCRRDPRRVISTYSSALRMLSPVKNPAGSSANWSMVNFRPSFNLVRTALADAQAQSTQIVIPPPMRNQEYCRNHLELELDFLTDQHHYEEDFPSIVNVSILEPEPIKQAVEPVEQSLLSGLSCRQAETRLRMASEACYEGEGSHWASSAFHINDATRHKSGPKSIGKHKAASECGRPPKSKIQKITESHQEGPSTSSNFLRMPGQLFPGAADFHISESLSDFGISDSEFNYSEDLWQEVDYNEFLLDQDDSGLLPGIEELEPLSDFTDIG